Installation and dependencies¶
pip install tibanna
tibanna is installed correctly, you can do the following.
> import tibanna
# this requires AWS credential set up as well tibanna -h
pip install tibanna_ff # or pip install tibanna-ff
If you install
tibanna will also be installed as its dependency. (no need to install
tibanna_ff is installed correctly, you can do the following.
> import tibanna > import tibanna_4dn > import tibanna_cgap > import tibanna_ffcommon
# these require AWS credential set up as well tibanna -h tibanna_4dn -h tibanna_cgap -h
The following environment variables are required for
.aws/config are set up.
export AWS_ACCESS_KEY_ID=<aws_key> export AWS_SECRET_ACCESS_KEY=<aws_secret_key> export AWS_DEFAULT_REGION=<aws_region>
tibanna_cgap, the following environment variable is additionally required. (This is available only for the 4DN/CGAP developer team.)
Optionally, for both cases, the following environment variable can be set up to be able to skip specifying
--sfn <step_function_name> for most functions including